Bootstraps vide

This function generate a video showing the relocation of cells during the bootstraps

bootstrapsVideo(
  group = c("sudo", "docker"),
  scratch.folder,
  file,
  nCluster,
  separator,
  framePP = 200,
  permutationNumber
)

Arguments

group,

a character string. Two options: sudo or docker, depending to which group the user belongs

scratch.folder,

a character string indicating the path of the scratch folder

file,

a character string indicating the path of the file, with file name and extension included

nCluster,

which nCluster results to use for this analysis

separator,

separator used in count file, e.g. '\t', ','

framePP,

Number of frames for each bootstrap

permutationNumber,

Number of random bootstraps, should be less or equal to the total number of permutations used to generate tha clustering data

Value

a video

Author

Luca Alessandri, alessandri [dot] luca1991 [at] gmail [dot] com, University of Torino

Examples

if (FALSE) {
 bootstrapsVideo(group,scratch.folder,file,nCluster,separator)#
}