Cluster identification

This function executes a ubuntu docker that normalize all the permutation finding the rispective number of cluster respect the main clustering, the P0

clusterIdentification(
  group = c("sudo", "docker"),
  scratch.folder,
  file,
  nCluster,
  separator
)

Arguments

group,

a character string. Two options: sudo or docker, depending to which group the user belongs

scratch.folder,

a character string indicating the path of the scratch folder

file,

a character string indicating the path of the file, with file name and extension included

nCluster,

which nCluster ins interesting to use for this analysis

separator,

separator used in count file, e.g. '\t', ','

Value

Csv file with correct cluster name

Author

Luca Alessandri, alessandri [dot] luca1991 [at] gmail [dot] com, University of Torino

Examples

if (FALSE) {
 clusterIdentification(group,scratch.folder,file,nCluster,separator)#
}